Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015825426.1_cds_XP_016502334.1_15990
CDS Infomation

[gene=LOC107820547] [db_xref=GeneID:107820547] [protein=AAA-ATPase At3g50940-like] [protein_id=XP_016502334.1] [location=complement(join(12244..12645,13101..14132))] [gbkey=CDS]
Sequence

ATGTCTTCCTCGACAGAATCAAACATGGCCCTGGCCAAGACCATAATATCGACAGTAGGT
TCTATTGCTGCAACGGCCATGGTTGTCCGTTCAGTAATGCATGAAATTCTCCCATCAGAT
TTCCAAGATTATATCTCTATTGGCCTCAGGAATTTTTTCAACAGATTCTCAAATCATCAA
ACTATGGTGATTGATGAATTTGATGGCCTAGACGTAGACGGAGTTTACGAAGCTGCCCAA
ATTTACTTAGGCTCCAAACTCTCCCCAACAAACACTCATCGCTTCAAAATTAGCAAACCA
GCGAAGGAGAAAAATTTCAATGTCAGCATGGAACGCAATGAAGAAGTAATTGACTTTTAC
AACGGCCAAAAGTACACGTGGGTTTGGGTTTGTGAAGGATCATCATCAAGAAGATCGATA
TACAATCCACGTGACATGAACTCCACCCTAAGATCCGAGATTAGATCTTTTGAACTCACG
TTTCATCGTAAAAACAGGGAATTTGTCCTAGACACTTATTTACCCTACATTATCGACGAG
GCAAAATTGCTAAAACATGAAAAAAGGACACTCAAGATTCACACTGTGGATCATGACATG
ATCCATGATCTAAGTGAAGTATGGATGCCGGTGAATCTTGATCATCCTGCTACGTTTCAG
ACATTAGCAATGGATGTGGAACAAAAGGAAAGGATTGTGAAGGATTTGGACAGGTTTGTG
AAGAGGAAAGAGTATTATAGGGAAATTGGGAAAGCGTGGAAAAGAGGGTATTTGTTGTAT
GGTCCACCAGGTACTGGTAAATCTAGCTTGATTGCAGCTATGGCTAATTACTTGAATTTT
GATATATATGACTTGGAGTTGACTGAGGTGAAGAAGAATTCGGATTTACGCGGCTTGTTG
TTGGCTACTGCTAATAATTCTATTTTGGTGGTGGAGGATATTGATTGTTCTGTTGATTTG
CAAGATAAATTGGGCAACAGAGAGGCTGCTAATTCATCTTCAAATAATTCTCGTGATGAG
GAAGAAAGCAAGATAACATTGTCTGGATTACTGAATTTCATTGATGGTTTATGGTCAAGT
TGCGGGGATCAAAAGATAATAATTTTCACAACAAATCACATTGAAAAGCTCGACCCTGCA
TTGTTGAGGCCAGGTCGCATGGACATGCACATTCATATGGCATATTGTACTCCTTGCGGA
TTCAAGCTTCTTGCTGCTAATTATCTTGGTATTAAAGAACATAAACTGTTTGAAGAAACT
GAAGAGTTGATTGGAAAGACGGCGGTGACACCGGCGGAGGTGGCTGAGCAGCTGATGAAG
GAAGATGAAGTTGATATTTCACTTAATGGCTTGATTGAATTTCTTAACAGCAAGATGAAA
GAACAAGAAGAGGCTAAGGCTAAAGTGGATGACAATAAGGAGGAAAAGGGTTGA

Peptide Sequence

PEP ID

XP_016502334.1
PEP Infomation

PREDICTED: AAA-ATPase At3g50940-like [Nicotiana tabacum]
Sequence

MSSSTESNMALAKTIISTVGSIAATAMVVRSVMHEILPSDFQDYISIGLRNFFNRFSNHQ
TMVIDEFDGLDVDGVYEAAQIYLGSKLSPTNTHRFKISKPAKEKNFNVSMERNEEVIDFY
NGQKYTWVWVCEGSSSRRSIYNPRDMNSTLRSEIRSFELTFHRKNREFVLDTYLPYIIDE
AKLLKHEKRTLKIHTVDHDMIHDLSEVWMPVNLDHPATFQTLAMDVEQKERIVKDLDRFV
KRKEYYREIGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDIYDLELTEVKKNSDLRGLL
LATANNSILVVEDIDCSVDLQDKLGNREAANSSSNNSRDEEESKITLSGLLNFIDGLWSS
CGDQKIIIFTTNHIEKLDPALLRPGRMDMHIHMAYCTPCGFKLLAANYLGIKEHKLFEET
EELIGKTAVTPAEVAEQLMKEDEVDISLNGLIEFLNSKMKEQEEAKAKVDDNKEEKG

Transcript Sequence

Gene sequence data has not been registered.